PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Phvul.006G184600.1
Common NamePHAVU_006G184600g
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Phaseolus
Family bHLH
Protein Properties Length: 179aa    MW: 20320.4 Da    PI: 9.6881
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Phvul.006G184600.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.24.6e-111458855
                        HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                 HLH  8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                         Er+RR++++  f +L +l+P++   + k +s  + L +A++YIk+Lq
  Phvul.006G184600.1 14 TERNRRNQMKALFRKLNSLVPHQ---RTKAVSLPDQLGEATNYIKKLQ 58
                        6*********************9...7777*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.931657IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.7E-121271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.1E-121381IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.4E-71458IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000839.32E-51558No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    Send to blast
MENNPSSSVD RKFTERNRRN QMKALFRKLN SLVPHQRTKA VSLPDQLGEA TNYIKKLQMN  60
MEKMKKKKSM LLGIIEGPNV RMNEGGESLG LKSPRIEIQQ MGSALEVVLI TGLDSQFMFG  120
ETIRVLHEEG VHVVNASYNV IEDEVFHSIH CQEEKSANRA ARISERLKNF IYDSAYIP*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150381e-123AP015038.1 Vigna angularis var. angularis DNA, chromosome 5, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007148151.11e-130hypothetical protein PHAVU_006G184600g
TrEMBLV7BSZ61e-130V7BSZ6_PHAVU; Uncharacterized protein
STRINGGLYMA13G31211.12e-98(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9063498
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G20970.14e-33bHLH family protein